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Commits on Feb 12, 2026

• Migrate to pyproject.toml

  

  xelandernt

  authored and

  peterjc

  committed
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Commits on Oct 28, 2025

• Fully revert to old license metadata

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  peterjc

  committed
  c809938

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• Revert to old license metadata

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  peterjc

  committed
  ca57c0f

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• Update license metadata as per Core Metadata specification v2.4 (August 2024)

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  peterjc

  committed
  9cd846c

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Commits on Oct 10, 2025

• Test on Python 3.10 ~ 3.14

  peterjc

  committed
  37f6c5f

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Commits on Jul 11, 2025

• Extend the .counts method of an Alignment (#5011)

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  4 peopleauthored
  66ad0a0

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Commits on Mar 22, 2025

• Add InfernalIO module to setup.py

  

  drs

  authored and

  bow

  committed
  f4ceb1f

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Commits on Jan 21, 2025

• List data folders under setup.py's packages list

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  peterjc

  committed
  41982cd

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Commits on Jan 16, 2025

• commit

  

  Michiel de Hoon

  authored and

  peterjc

  committed
  de8b8e2

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Commits on Jan 15, 2025

• Drop Python 3.9; focus tests on 3.10 and 3.13 (#4912)

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  peterjc

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  0a19fee

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Commits on Dec 16, 2024

• setup.py: don't error on setuptools 75.3.0.post0

  

  FliegendeWurst

  authored and

  peterjc

  committed
  1955711

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Commits on Dec 6, 2024

• Update version classifiers in setup.py

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  peterjc

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  004ee91

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Commits on Aug 26, 2024

• Run tests with sanitizers and the debug allocator, use PyMem_Raw instead of malloc-family (#4791)

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  michaelfm1211

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  80743c4

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Commits on Jun 26, 2024

• Apply isort (forcing single lines, not sorting by type) via ruff

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  ruff-isort

  authored and

  peterjc

  committed
  de0bb21

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• Check for presence of wheel with setuptools older than 70.1

  

  hoodmane

  authored and

  peterjc

  committed
  e0731ed

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• Remove error message if wheel is not installed

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  hoodmane

  authored and

  peterjc

  committed
  de1276c

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Commits on Jun 11, 2024

• Add BinaryCIF parser (#4707)

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  Will-Tyler

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  4fe6640

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Commits on Jun 7, 2024

• Use C code to parse alignments in which dashes represent gaps (#4737)

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  mdehoon

  and

  Michiel de Hoon

  authored
  53a65b4

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Commits on May 13, 2024

• Drop Python 3.8 and deprecate Python 3.9 support

  peterjc

  committed
  f3be516

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Commits on Mar 29, 2024

• In Bio.Align, deprecate infer_coordinates, and use parse_printed_alignment instead (#4684)

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  mdehoon

  and

  Michiel de Hoon

  authored
  f2dd420

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Commits on Nov 27, 2023

• Remove the deprecated Bio.PDB.QCPSuperimposer module (#4511)

  mdehoon

  authored
  b2e9938

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Commits on Nov 17, 2023

• update (#4495)

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  mdehoon

  and

  Michiel de Hoon

  authored
  3d541b6

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Commits on Nov 7, 2023

• Remove the parser for plain text output from Blast (#4488)

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  mdehoon

  and

  Michiel de Hoon

  authored
  c1093ec

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Commits on Nov 2, 2023

• Align codonaligner (#4479)

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  mdehoon

  authored
  e33876c

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Commits on Oct 11, 2023

• Test on Python 3.12 (#4454)

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  peterjc

  authored
  1087dff

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Commits on Jul 11, 2023

• Fix __version__ value load to allow installation through poetry (#4328)

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  joelibaceta

  authored
  01e4e88

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Commits on May 22, 2023

• Dropping Python 3.7 support

  peterjc

  committed
  ed8ffdf

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Commits on Apr 25, 2022

• Add CEAligner module for structural alignment of 3d molecules (#3849)

  JoaoRodrigues

  authored
  76796c9

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Commits on Jan 21, 2022

• Support Python 3.10 (#3844)

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  peterjc

  authored
  cffae09

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Commits on Jan 18, 2022

• Drop mentions of Python 3.6

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  peterjc

  committed
  6e4b0a9

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Commits on Jan 14, 2022

• Include classifier for Python 3.9

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  peterjc

  authored
  2dd97e7

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Commits on Sep 6, 2021

• Drop Python 3.6, require Python 3.7 now

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  peterjc

  committed
  290abb7

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• Subsmat removal (#3713)

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  mdehoon

  authored
  a890e8c

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Commits on Sep 3, 2021

• Fixing another typo in our code

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  peterjc

  committed
  703a13b

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Commits on May 25, 2021

• removed deprecated cose

  

  mdehoon

  authored and

  peterjc

  committed
  817dc60

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