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Minor COLAB modelzoo improvements #2103

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Merged
MMathisLab merged 2 commits into from
Dec 23, 2022
Merged

Minor COLAB modelzoo improvements #2103

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34490be
Change dataset_type to single-animal
jeylau Dec 23, 2022
ead6bdc
Minor improvements
jeylau Dec 23, 2022
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1 change: 1 addition & 0 deletions deeplabcut/create_project/modelzoo.py
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Original file line number Diff line number Diff line change
Expand Up @@ -261,6 +261,7 @@ def create_pretrained_project(
download_huggingface_model(model, train_dir)

pose_cfg = deeplabcut.auxiliaryfunctions.read_plainconfig(path_train_config)
pose_cfg["dataset_type"] = "imgaug"
print(path_train_config)
# Updating config file:
dict_ = {
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31 changes: 11 additions & 20 deletions examples/COLAB/COLAB_DLC_ModelZoo.ipynb
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Original file line number Diff line number Diff line change
Expand Up @@ -3,8 +3,8 @@
{
"cell_type": "markdown",
"metadata": {
"id": "view-in-github",
"colab_type": "text"
"colab_type": "text",
"id": "view-in-github"
},
"source": [
"<a href=\"https://colab.research.google.com/github/DeepLabCut/DeepLabCut/blob/master/examples/COLAB/COLAB_DLC_ModelZoo.ipynb\" target=\"_parent\"><img src=\"https://colab.research.google.com/assets/colab-badge.svg\" alt=\"Open In Colab\"/></a>"
Expand Down Expand Up @@ -56,22 +56,17 @@
"source": [
"#click the play icon (this will take a few minutes to install all the dependencies!)\n",
"#Install the latest DeepLabCut version from master:\n",
"!pip install https://github.com/DeepLabCut/DeepLabCut/archive/master.zip\n",
"!pip install 'deeplabcut[tf,modelzoo]'==2.3.0\n",
"!pip install huggingface_hub\n",
"%reload_ext numpy\n",
"%reload_ext matplotlib\n",
"%reload_ext mpl_toolkits"
"!pip install \"deeplabcut[tf,modelzoo] @ git+https://github.com/DeepLabCut/DeepLabCut.git@master\""
]
},
{
"cell_type": "markdown",
"source": [
"###proTip: be sure to click \"restart runtime button\" if it appears above ^ "
],
"metadata": {
"id": "zYm6DljQB0Y7"
}
},
"source": [
"###proTip: be sure to click \"restart runtime button\" if it appears above ^ "
]
},
{
"cell_type": "markdown",
Expand All @@ -92,10 +87,6 @@
"outputs": [],
"source": [
"import os\n",
"\n",
"# stifle tensorflow warnings, like we get it already.\n",
"os.environ['TF_CPP_MIN_LOG_LEVEL'] = '2'\n",
"\n",
"import deeplabcut"
]
},
Expand Down Expand Up @@ -295,11 +286,12 @@
],
"metadata": {
"colab": {
"include_colab_link": true,
"name": "Copy of COLAB_DLC_ModelZoo.ipynb",
"provenance": [],
"toc_visible": true,
"include_colab_link": true
"toc_visible": true
},
"gpuClass": "standard",
"kernelspec": {
"display_name": "Python 3",
"language": "python",
Expand All @@ -316,8 +308,7 @@
"nbconvert_exporter": "python",
"pygments_lexer": "ipython3",
"version": "3.7.7"
},
"gpuClass": "standard"
}
},
"nbformat": 4,
"nbformat_minor": 0
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