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[Snyk] Security upgrade org.biojava:biojava-structure from 5.3.1-SNAPSHOT to 6.1.0 - #71

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This PR was automatically created by Snyk using the credentials of a real user.


Snyk has created this PR to fix one or more vulnerable packages in the `maven` dependencies of this project.

Changes included in this PR

  • Changes to the following files to upgrade the vulnerable dependencies to a fixed version:
    • biojava-integrationtest/pom.xml

Vulnerabilities that will be fixed

With an upgrade:
Severity Priority Score (*) Issue Upgrade Breaking Change Exploit Maturity Reachability
critical severity 833/1000
Why? Currently trending on Twitter, Mature exploit, Has a fix available, CVSS 10
Remote Code Execution (RCE)
SNYK-JAVA-ORGAPACHELOGGINGLOG4J-2314720
org.biojava:biojava-structure:
5.3.1-SNAPSHOT -> 6.1.0
No Mature No Path Found
critical severity 675/1000
Why? Proof of Concept exploit, Has a fix available, CVSS 9
Remote Code Execution (RCE)
SNYK-JAVA-ORGAPACHELOGGINGLOG4J-2320014
org.biojava:biojava-structure:
5.3.1-SNAPSHOT -> 6.1.0
No Proof of Concept No Path Found
high severity 600/1000
Why? Proof of Concept exploit, Has a fix available, CVSS 7.5
Denial of Service (DoS)
SNYK-JAVA-ORGAPACHELOGGINGLOG4J-2321524
org.biojava:biojava-structure:
5.3.1-SNAPSHOT -> 6.1.0
No Proof of Concept No Path Found
medium severity 555/1000
Why? Proof of Concept exploit, Has a fix available, CVSS 6.6
Arbitrary Code Execution
SNYK-JAVA-ORGAPACHELOGGINGLOG4J-2327339
org.biojava:biojava-structure:
5.3.1-SNAPSHOT -> 6.1.0
No Proof of Concept No Path Found

(*) Note that the real score may have changed since the PR was raised.

Check the changes in this PR to ensure they won't cause issues with your project.


Note: You are seeing this because you or someone else with access to this repository has authorized Snyk to open fix PRs.

For more information:
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📚 Read more about Snyk's upgrade and patch logic


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🦉 Remote Code Execution (RCE)
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