Commits

History for

Commits on Jan 14, 2015

Minor improvement in parser
josemduarte
committed
93f9bb8
Solving issue #230, now bioassembly ids are strictly numerical
josemduarte
committed
b4f8661
Defaulting to http for PDB downloads(structure and chem comp files)
josemduarte
committed
7b3871a

Commits on Jan 13, 2015

Commits on Jan 12, 2015

Commits on Jan 9, 2015

Improvements to LocalPDBDirectory (aka *FileReader)
sbliven
committed
bc7661a
Better docs
josemduarte
committed
f6ea6cd
Fix warnings
sbliven
committed
bb18737
Changed BiologicalAssemblyTransformation to use vecmath's Matrix4d
josemduarte
committed
00c47f6
Removing isSplit parameters globally (#225)
sbliven
committed
3254acd
Major refactoring of PDBFileReader and MMCIFFileReader
sbliven
committed
4d33bde

Commits on Jan 8, 2015

Removed the nrBioassemblies field
josemduarte
committed
88bfec6
Fixed bug: FileParsingParams.isParseBioAssembly was not respected in
josemduarte
committed
b8f70cc

Commits on Jan 6, 2015

More logging fixes #155
josemduarte
committed
de5422a
Moving getPredominantGroupType to StructureTools and added better docs
josemduarte
committed
9d54c12
Making Group.isWater() usage more consistent, removed some warnings
josemduarte
committed
656410e

Commits on Dec 18, 2014

Documentation improvements
sbliven
committed
14eeb03
Merge remote-tracking branch 'biojava/master'
sbliven
committed
cf4b3eb

Commits on Dec 17, 2014

Improving StructureInterface.toPDB
josemduarte
committed
40d97e9
Fixing an altLoc bug in mmcif parsing: parent chain wasn't set
josemduarte
committed
93b8bc7

Commits on Dec 15, 2014

Fix #219
sbliven
committed
aab017f
Adding @Override and @Deprecated tags where applicable
sbliven
committed
d8687f0

Commits on Dec 11, 2014

Commits on Dec 10, 2014

Fixed important bug: ChainImpl.clone wasn't deep copying seqres groups
josemduarte
committed
fe7ac42

Commits on Dec 9, 2014