Commits

History for

Commits on Nov 27, 2013

Add a test case based on Daniel Cameron's example of failing FeatureList
emckee2006
committed
2bd7c20

Commits on Oct 16, 2013

Clean up the majority of compile warnings
emckee2006
committed
8faddba

Commits on Apr 27, 2013

using temporary file instead of updating
aalhossary
committed
23bc366
using temp file for File tmp = File
aalhossary
committed
706858b

Commits on Aug 10, 2012

fix for unit test failures, use proper temp directory for test output files
heuermh
committed
158e7bc

Commits on Mar 15, 2012

Commits on Mar 12, 2012

Commits on Aug 30, 2011

Ignore unit test output
sbliven
committed
a733437

Commits on Jan 24, 2011

Added FeatureHelper which allows you to build indexes based on a feature attribute value. This is then used in GeneFeatureHelper when parsing a gmod gff3 file to quickly find the features that belo…
willishf
committed
38ed004

Commits on Jan 1, 2011

Test was failing if the location was at 1 and negative strand because internally stored as 0 and you can't have negative 0
willishf
committed
d7f76fe

Commits on Dec 23, 2010

Changed test case reference where stop codons are being returned as * now
willishf
committed
0447c67

Commits on Dec 20, 2010

Minor updates
willishf
committed
af17288

Commits on Nov 2, 2010

Modified in line with latest version of biojava3-core's Sequence interface
andrewyatz
committed
7faa208

Commits on Oct 22, 2010

making test less verbose
andreasprlic
committed
95bb32f

Commits on Oct 21, 2010

Did not realise this file is used in the test case
andrewyatz
committed
dbc2420
Updating apple rna
andrewyatz
committed
0fd7059
Tracking down why testGetProteinSequence fails
willishf
committed
1b45539

Commits on Oct 20, 2010

uncommenting broken junit test
andreasprlic
committed
b119f24

Commits on Oct 18, 2010

Fixed problem where GmodGFF3 reader was not picking up five_prime_UTR or three_prime_UTR so gene was not the correct start and stop index
willishf
committed
121e3b9

Commits on Oct 15, 2010

Commits on Mar 17, 2010

adding new module biojava3-genome
andreasprlic
committed
e3023ce

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