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"""
Use Dataverse native APIs described here: https://github.com/IQSS/dataverse/tree/master/scripts/api
5/8/2013 - scratch work, examining API
6/5/2013 - Back to implementing some API work
6/6/2013 - Move function parameters into API_SPECS, create functions on init
Requires the python requests library: http://docs.python-requests.org
"""
import os
import sys
import json
import requests
from msg_util import *
import types # MethodType, FunctionType
from datetime import datetime
from single_api_spec import SingleAPISpec
def msg(s): print s
def dashes(char='-'): msg(40*char)
def msgt(s): dashes(); msg(s); dashes()
def msgx(s): dashes('\/'); msg(s); dashes('\/'); sys.exit(0)
class DataverseAPILink:
"""
Convenience class to access the Dataverse API described in github:
https://github.com/IQSS/dataverse/tree/master/scripts/api
Example:
from dataverse_api_link import DataverseAPILink
server_with_api = 'https://dvn-build.hmdc.harvard.edu'
dat = DataverseAPILink(server_with_api, use_https=False, apikey='pete')
dat.set_return_mode_python()
print dat.list_users()
print dat.list_roles()
print dat.list_dataverses()
print dat.list_datasets()
print dat.get_dataverse_by_id_or_alias(5)
print dat.view_dataset_metadata_by_id_version(123, 57)
print dat.view_root_dataverse()
print dat.get_user_data(1)
"""
RETURN_MODE_STR = 'RETURN_MODE_STR'
RETURN_MODE_PYTHON = 'RETURN_MODE_PYTHON'
HTTP_GET = 'GET'
HTTP_POST = 'POST'
HTTP_DELETE = 'DELETE'
HTTP_METHODS = [HTTP_GET, HTTP_POST, HTTP_DELETE]
# Each List corresponds to 'new_function_name', 'name', 'url_path', 'use_api_key', 'num_id_vals', 'use_params_dict'
#
API_READ_SPECS = (
# USERS
[ 'list_users', 'List Users', '/api/builtin-users', False, 0]\
, ['get_user_data', 'Get metadata for a specific user', '/api/builtin-users/%s' % SingleAPISpec.URL_PLACEHOLDER, False, 1]\
# ROLES
, ['list_roles', 'List Roles', '/api/roles', False, 0]\
# Datasets
, ['list_datasets', 'List Datasets', '/api/datasets', True, 0]\
, ['view_dataset_by_id', 'View Dataset By ID' \
, '/api/datasets/%s' % (SingleAPISpec.URL_PLACEHOLDER,), True, 1]\
#, ['view_dataset_versions_by_id', 'View Dataset By ID', '/api/datasets/%s/versions' % SingleAPISpec.URL_PLACEHOLDER, True, True]\
# Dataverses
, ['list_dataverses', 'List Dataverses', '/api/dataverses', False, 0]\
, ['get_dataverse_by_id_or_alias', 'View Dataverse by ID or Alias', '/api/dataverses/%s' % (SingleAPISpec.URL_PLACEHOLDER,), False, 1]\
, ['view_root_dataverse', 'View Root Dataverse', '/api/dataverses/:root', False, 0]\
# Metadata
, ['list_metadata_blocks', 'List metadata blocks', '/api/metadatablocks', False, 0]
, ['view_dataset_metadata_by_id_version', 'View Dataset By ID'\
, '/api/datasets/%s/versions/%s/metadata' % (SingleAPISpec.URL_PLACEHOLDER, SingleAPISpec.URL_PLACEHOLDER), True, 2]\
)
API_WRITE_SPECS = (
# Create a Dataverse
# curl -H "Content-type:application/json" -X POST -d @data/dv-pete-top.json "http://localhost:8080/api/dataverses/root?key=pete"
#
#[ 'create_dataverse', 'Create Dataverse', '/api/dataverses/%s' % SingleAPISpec.URL_PLACEHOLDER, True, 1, True]\
# Create a User
# curl -H "Content-type:application/json" -X POST -d @data/userPete.json "http://localhost:8080/api/builtin-users?password=pete"
#
#[ 'create_user', 'Create User', '/api/builtin-users?password=%s' % SingleAPISpec.URL_PLACEHOLDER, False, 1, True]\
#,
)
API_DELETE_SPECS = (
# Dataset
[ 'delete_dataset', 'Delete Dataset', '/api/builtin-users/%s' % SingleAPISpec.URL_PLACEHOLDER, True, True]\
#DELETE http://{{SERVER}}/api/datasets/{{id}}?key={{apikey}}
)
def __init__(self, server_name, use_https, apikey=None):
"""
:param server_name: e.g. dataverse.org, dvn-build.hmdc.harvard.edu, etc.
:type server_name: str
:param use_https: Use https for api calls?
:type use_https: boolean
"""
self.server_name = server_name
if len(self.server_name.split('//')) > 1: # remove accidental additional of http:// or https://
self.server_name = self.server_name.split('//')[-1]
if self.server_name.endswith('/'):
self.server_name = self.server_name[:-1]
self.use_https = use_https
self.apikey = apikey
self.update_server_name()
self.return_mode = self.RETURN_MODE_STR
self.bind_basic_functions()
def set_return_mode_python(self):
"""API calls return JSON text response as a Python object
Uses json.loads(json_str)
"""
self.return_mode = self.RETURN_MODE_PYTHON
def set_return_mode_string(self):
"""API calls return JSON responses as a string"""
self.return_mode = self.RETURN_MODE_STR
def update_server_name(self):
if self.server_name is None:
raise Exception('Server name is None!')
if self.server_name.endswith('/'): # cut trailing slash
self.server_name = self.server_name[-1]
server_name_pieces = self.server_name.split('//')
if len(server_name_pieces) > 1:
self.server_name = server_name_pieces[1]
def get_server_name(self):
if self.use_https:
return 'https://' + self.server_name
return 'http://' + self.server_name
def make_api_call(self, url_str, method, params={}, headers=None):
"""
Use the requests library to make the actual API call
:param url_str: str, url to call
:param method: str indicating http method: GET, POST, DELETE, etc. Must be in self.HTTP_METHODS: GET, POST, DELETE,
:param params: dict containing python parameters
:param headers: optional dict containing headers. e.g. {'content-type': 'application/json'}
:returns: response from the request
:rtype: depends on self.RETURN_MODE_PYTHON; either text or JSON converted to python dict
"""
msg('url_str: [%s]\nmethod:[%s]\nparams:[%s]\nheaders:[%s]' % (url_str, method, params, headers))
if url_str is None:
return None
if not method in self.HTTP_METHODS:
msgt('Error: Method not found: %s' % method)
if not type(params) == dict:
msgt('Params must be a python dict, {}')
params = json.dumps(params)
if method == self.HTTP_GET:
r = requests.get(url_str, data=params)
elif method == self.HTTP_POST:
if headers is not None:
r = requests.post(url_str, data=params, headers=headers)
else:
r = requests.post(url_str, data=params)
elif method == self.HTTP_DELETE:
r = requests.delete(url_str, data=params)
msg('Status Code: %s' % r.status_code)
msg('Encoding: %s' % r.encoding)
msg('Text: %s' % r.text)
if self.return_mode == self.RETURN_MODE_PYTHON:
return r.json()
#print json.dumps(json.loads(s), indent=4)
try:
return json.dumps(json.loads(r.text), indent=4)
except:
pass
return r.text
def create_user(self, dv_params, new_password):
"""
Create a user
:param dv_params: dict containing the parameters for the new user
:param new_password: str for the user's password
"""
msgt('create_user')
if not type(dv_params) is dict:
msgx('dv_params is None')
# [ 'create_user', 'Create User', '/api/builtin-users?password=%s' % SingleAPISpec.URL_PLACEHOLDER, False, 1, True]\
url_str = self.get_server_name() + '/api/builtin-users?password=%s' % (new_password)
headers = {'content-type': 'application/json'}
return self.make_api_call(url_str, self.HTTP_POST, params=dv_params, headers=headers)
def create_dataverse(self, parent_dv_alias_or_id, dv_params):
"""Create a dataverse
POST http://{{SERVER}}/api/dataverses/{{ parent_dv_name }}?key={{username}}
:param parent_dv_alias_or_id: str or integer, the alias or id of an existing datavese
:param dv_params: dict containing the parameters for the new dataverse
Sample: Create Dataverse
from dataverse_api import DataverseAPILink
server_with_api = 'dvn-build.hmdc.harvard.edu'
dat = DataverseAPILink(server_with_api, use_https=False, apikey='pete')
dv_params = {
"alias":"hm_dv",
"name":"Home, Home on the Dataverse",
"affiliation":"Affiliation value",
"contactEmail":"pete@mailinator.com",
"permissionRoot":False,
"description":"API testing"
}
parent_dv_alias_or_id = 'root'
print dat.create_dataverse(parent_dv_alias_or_id, dv_params)
"""
msgt('create_dataverse')
if not type(dv_params) is dict:
msgx('dv_params is None')
url_str = self.get_server_name() + '/api/dataverses/%s?key=%s' % (parent_dv_alias_or_id, self.apikey)
headers = {'content-type': 'application/json'}
return self.make_api_call(url_str, self.HTTP_POST, params=dv_params, headers=headers)
def publish_dataverse(self, dv_id_or_name):
"""
Publish a dataverse based on its id or alias
#POST http://{{SERVER}}/api/dataverses/{{identifier}}/actions/:publish?key={{apikey}}
:param dv_id_or_name: Dataverse id (str or int) or alias (str)
"""
msgt('publish_dataverse')
print 'dv_id_or_name', dv_id_or_name
if dv_id_or_name is None:
msgx('dv_id_or_name is None')
url_str = self.get_server_name() + '/api/dataverses/%s/actions/:publish?key=%s' % (dv_id_or_name, self.apikey)
headers = {'content-type': 'application/json'}
return self.make_api_call(url_str, self.HTTP_POST)
def show_api_info(self):
for spec in self.API_READ_SPECS:
print spec[0]
def bind_single_function(self, spec_list, function_name_for_api_call):
"""
:param spec_list: list or tuple defining function sepcs
:param function_name_for_api_call: str naming coded function in the DataverseAPILink
"""
# Load the function specs
single_api_spec = SingleAPISpec(spec_list)
# Pull the code to generate the function. e.g. def function_name(params): etc, etc
code_str = single_api_spec.get_code_str(function_name_for_api_call) # ---- GET ----
# Create the function
exec(code_str)
# Bind the function to this instance of DataverseAPILink
self.__dict__[single_api_spec.new_function_name] = types.MethodType(eval(single_api_spec.new_function_name), self)
def bind_basic_functions(self):
"""
Go through API specs and add the functions to DataverseAPILink
"""
# Add read functions
for spec in self.API_READ_SPECS:
self.bind_single_function(spec, 'make_api_get_call')
# Decided to explicitly write add functions for clarity
# Add write functions
#for spec in self.API_WRITE_SPECS:
# self.bind_single_function(spec, 'make_api_write_call')
def make_api_write_call(self, call_name, url_path, use_api_key=False, id_val=None, params_dict={}):
msgt(call_name)
print 'params_dict', params_dict
if not type(params_dict) is dict:
msgx('params_dict is not a dict. Found: %s' % type(params_dict))
if use_api_key:
url_str = '%s%s?key=%s' % (self.get_server_name(), url_path, self.apikey)
else:
url_str = '%s%s' % (self.get_server_name(), url_path)
headers = {'content-type': 'application/json'}
return self.make_api_call(url_str, self.HTTP_POST, params=params_dict, headers=headers)
def make_api_get_call(self, call_name, url_path, use_api_key=False, id_val=None):
msgt(call_name)
if use_api_key:
url_str = '%s%s?key=%s' % (self.get_server_name(), url_path, self.apikey)
else:
url_str = '%s%s' % (self.get_server_name(), url_path)
return self.make_api_call(url_str, self.HTTP_GET)
def make_api_delete_call(self, call_name, url_path, use_api_key=False, id_val=None):
msgt(call_name)
if use_api_key:
url_str = '%s%s?key=%s' % (self.get_server_name(), url_path, self.apikey)
else:
url_str = '%s%s' % (self.get_server_name(), url_path)
return self.make_api_call(url_str, self.HTTP_DELETE)#, kwargs)
def save_to_file(self, fname, content):
dirname = os.path.dirname(fname)
if not os.path.isdir(dirname):
msgx('This directory does not exist: %s' % dirname)
fh = open(fname, 'w')
fh.write(content)
fh.close()
msg('File written: %s' % fname)
def save_current_metadata(self, output_dir):
"""
For the current server, save JSON with information on:
- Users
- Dataverses
- Datasets
"""
msgt('run_dataverse_backup')
if not os.path.isdir(output_dir):
msgx('This directory does not exist: %s' % output_dir)
#date_str = datetime.now().strftime('%Y-%m%d_%H%M')
date_str = datetime.now().strftime('%Y-%m%d_%H')
self.set_return_mode_string()
#---------------------------
# Retrieve the users
#---------------------------
user_json = self.list_users()
self.save_to_file(os.path.join(output_dir, 'users_%s.json' % date_str), user_json)
#---------------------------
# Retrieve the roles
#---------------------------
#roles_json = self.list_roles()
#self.save_to_file(os.path.join(output_dir, 'roles_%s.json' % date_str), roles_json)
#---------------------------
# Retrieve the dataverses
#---------------------------
dv_json = self.list_dataverses()
self.save_to_file(os.path.join(output_dir, 'dataverses_%s.json' % date_str), dv_json)
#---------------------------
# Retrieve the datasets
#---------------------------
dset_json = self.list_datasets()
self.save_to_file(os.path.join(output_dir, 'datasets_%s.json' % date_str), dset_json)
def delete_dataverse_by_id(self, id_val):
msgt('delete_dataverse_by_id: %s' % id_val)
url_str = self.get_server_name() + '/api/dataverses/%s?key=%s' % (id_val, self.apikey)
return self.make_api_call(url_str, self.HTTP_DELETE)
if __name__=='__main__':
import time
#POST http://{{SERVER}}/api/dataverses/{{identifier}}/actions/:publish?key={{apikey}}
server_with_api = 'https://dvn-build.hmdc.harvard.edu'
dat = DataverseAPILink(server_with_api, use_https=False, apikey='pete')
#dat.save_current_metadata('demo-data')
#sys.exit(0)
#dat.set_return_mode_string()
""" """
dv_params = {
"alias":"hm_dv",
"name":"Home, Home on the Dataverse",
"affiliation":"Affiliation value",
"contactEmail":"pete@mailinator.com",
"permissionRoot":False,
"description":"API testing"
}
print dat.create_dataverse('root', dv_params)
#print dat.create_user('some_pw', dv_params)
"""
print dat.get_dataverse_by_id_or_alias(5)
print dat.view_dataset_metadata_by_id_version(123, 57)
print dat.list_users()
print dat.list_roles()
print dat.list_datasets()
print dat.list_dataverses()
print dat.view_root_dataverse()
print dat.get_user_data(1)
print dat.list_metadata_blocks()
"""