Skip to content
Navigation Menu
Sign in
Appearance settings
Platform
AI CODE CREATION
GitHub Copilot
Write better code with AI
GitHub Copilot app
Direct agents from issue to merge
MCP Registry
Integrate external tools
DEVELOPER WORKFLOWS
Actions
Automate any workflow
Codespaces
Instant dev environments
Issues
Plan and track work
Code Review
Manage code changes
Code Quality
Enforce quality at merge
APPLICATION SECURITY
GitHub Advanced Security
Find and fix vulnerabilities
Code security
Secure your code as you build
Secret protection
Stop leaks before they start
EXPLORE
Why GitHub
Documentation
Blog
Changelog
Marketplace
View all features
Solutions
BY COMPANY SIZE
Enterprises
Small and medium teams
Startups
Nonprofits
BY USE CASE
App Modernization
DevSecOps
DevOps
CI/CD
View all use cases
BY INDUSTRY
Healthcare
Financial services
Manufacturing
Government
View all industries
View all solutions
Resources
EXPLORE BY TOPIC
AI
Software Development
DevOps
Security
View all topics
EXPLORE BY TYPE
Customer stories
Events & webinars
Ebooks & reports
Business insights
GitHub Skills
SUPPORT & SERVICES
Documentation
Customer support
Community forum
Trust center
Partners
View all resources
Open Source
COMMUNITY
GitHub Sponsors
Fund open source developers
PROGRAMS
Security Lab
Maintainer Community
GitHub Stars
Archive Program
REPOSITORIES
Topics
Trending
Collections
Enterprise
ENTERPRISE SOLUTIONS
Enterprise platform
AI-powered developer platform
AVAILABLE ADD-ONS
GitHub Advanced Security
Enterprise-grade security features
Copilot for Business
Enterprise-grade AI features
Premium Support
Enterprise-grade 24/7 support
Pricing
Search
/
Sign in
Sign up
Appearance settings
You signed in with another tab or window.
Reload
to refresh your session.
You signed out in another tab or window.
Reload
to refresh your session.
You switched accounts on another tab or window.
Reload
to refresh your session.
Dismiss alert
{{ message }}
tmrpavan
/
biojava
Public
forked from
biojava/biojava
Notifications
You must be signed in to change notification settings
Fork
0
Star
0
Code
Pull requests
0
Actions
Projects
Security and quality
0
Insights
Additional navigation options
Code
Pull requests
Actions
Projects
Security and quality
Insights
Commits
Branch selector
master
User selector
All users
Datepicker
All time
Commit history
Commits on Apr 6, 2023
Updating README.md
josemduarte
committed
e0b86d0
View commit details
Copy full SHA for e0b86d0
Browse repository at this point
Updating CHANGELOG.md
josemduarte
committed
9e4972d
View commit details
Copy full SHA for 9e4972d
Browse repository at this point
[maven-release-plugin] prepare for next development iteration
josemduarte
committed
24bda43
View commit details
Copy full SHA for 24bda43
Browse repository at this point
[maven-release-plugin] prepare release biojava-7.0.1
josemduarte
committed
7b32a76
View commit details
Copy full SHA for 7b32a76
Browse repository at this point
Upgrading nexus staging plugin to avoid known issue happening at release.
Show description for 9872ecb
josemduarte
committed
9872ecb
View commit details
Copy full SHA for 9872ecb
Browse repository at this point
[maven-release-plugin] rollback the release of biojava-7.0.1
josemduarte
committed
ea45217
View commit details
Copy full SHA for ea45217
Browse repository at this point
[maven-release-plugin] prepare for next development iteration
josemduarte
committed
30a2429
View commit details
Copy full SHA for 30a2429
Browse repository at this point
[maven-release-plugin] prepare release biojava-7.0.1
josemduarte
committed
a8ea225
View commit details
Copy full SHA for a8ea225
Browse repository at this point
Merge pull request #1058 from xcalibur91/master
Show description for 27a5799
josemduarte
authored
27a5799
View commit details
Copy full SHA for 27a5799
Browse repository at this point
Refactoring : Adding Static constants for NUCLEOTIDE_BACKBONE_ATOMS and AMINOACID_BACKBONE_ATOMS
Sreejith Nair
committed
a135683
View commit details
Copy full SHA for a135683
Browse repository at this point
Commits on Apr 5, 2023
Merge pull request #1057 from JonStargaryen/master
Show description for c573d5b
sbittrich
authored
c573d5b
View commit details
Copy full SHA for c573d5b
Browse repository at this point
Refactoring : Changes to refactor isPureTranslation method to eliminate complex conditional smell
Sreejith Nair
committed
4676fe7
View commit details
Copy full SHA for 4676fe7
Browse repository at this point
Refactoring Decompose conditional : Changes to refactor getContactOverlapScore method to eliminate complex conditional smell
Sreejith Nair
committed
2ddf8b0
View commit details
Copy full SHA for 2ddf8b0
Browse repository at this point
Refactoring : Extract method changes to reduce the cyclomatic complexity of getBackboneAtomArray
Sreejith Nair
committed
bf40264
View commit details
Copy full SHA for bf40264
Browse repository at this point
Commits on Apr 3, 2023
Merge remote-tracking branch 'upstream/master'
sbittrich
committed
3c83e8b
View commit details
Copy full SHA for 3c83e8b
Browse repository at this point
Test fixes after 4hhb remediation
josemduarte
committed
a83058a
View commit details
Copy full SHA for a83058a
Browse repository at this point
Ignoring a test that broke after 4hhb remediation
josemduarte
committed
f64b73c
View commit details
Copy full SHA for f64b73c
Browse repository at this point
Merge remote-tracking branch 'upstream/master'
sbittrich
committed
04d3f05
View commit details
Copy full SHA for 04d3f05
Browse repository at this point
Less garbage in GW actions output
josemduarte
committed
b39fb59
View commit details
Copy full SHA for b39fb59
Browse repository at this point
Fixing test after PDB id obsoletion
josemduarte
committed
5de0163
View commit details
Copy full SHA for 5de0163
Browse repository at this point
pom cleanup
sbittrich
committed
7e3e738
View commit details
Copy full SHA for 7e3e738
Browse repository at this point
Commits on Jan 31, 2023
Updating docs after 7.0.0 release
josemduarte
committed
53179ad
View commit details
Copy full SHA for 53179ad
Browse repository at this point
[maven-release-plugin] prepare for next development iteration
josemduarte
committed
a016539
View commit details
Copy full SHA for a016539
Browse repository at this point
[maven-release-plugin] prepare release biojava-7.0.0
josemduarte
committed
b7fe72c
View commit details
Copy full SHA for b7fe72c
Browse repository at this point
Commits on Jan 30, 2023
More nullpdbid tests (#1056)
Show description for 043eb40
josemduarte
and
sbliven
authored
043eb40
View commit details
Copy full SHA for 043eb40
Browse repository at this point
Merge pull request #1055 from josemduarte/fixCifSrcNatParsing
Show description for 5218e59
josemduarte
authored
5218e59
View commit details
Copy full SHA for 5218e59
Browse repository at this point
Merge pull request #1046 from BulkSecurityGeneratorProjectV2/fix/JLL/temporary_file_local_information_disclosure
Show description for 3747e5d
josemduarte
authored
3747e5d
View commit details
Copy full SHA for 3747e5d
Browse repository at this point
Merge pull request #1053 from josemduarte/v7-java11
Show description for ad1d2d6
josemduarte
authored
ad1d2d6
View commit details
Copy full SHA for ad1d2d6
Browse repository at this point
More comprehensive fix
josemduarte
committed
5b99e7a
View commit details
Copy full SHA for 5b99e7a
Browse repository at this point
Commits on Jan 29, 2023
Fix for entity_src_nat category parsing, when some items missing
josemduarte
committed
b0a1da5
View commit details
Copy full SHA for b0a1da5
Browse repository at this point
Commits on Jan 27, 2023
Latest ciftools-java
josemduarte
committed
d61321b
View commit details
Copy full SHA for d61321b
Browse repository at this point
Commits on Jan 26, 2023
Merge pull request #1024 from aalhossary/add_file_download_validation
Show description for 1a256ed
aalhossary
authored
1a256ed
View commit details
Copy full SHA for 1a256ed
Browse repository at this point
Commits on Jan 25, 2023
Biojava urls
josemduarte
committed
f1ef01a
View commit details
Copy full SHA for f1ef01a
Browse repository at this point
Upgrading ciftools to latest j11-based
josemduarte
committed
be227fd
View commit details
Copy full SHA for be227fd
Browse repository at this point
Maven enforcer bump to 11, unified variables
josemduarte
committed
5549878
View commit details
Copy full SHA for 5549878
Browse repository at this point
Previous
Next
You can’t perform that action at this time.
Sreejith Nair