name: PR Build

on:

push:

branches:

- '!master'

pull_request:

branches:

- master

permissions:

contents: read # to fetch code (actions/checkout)

jobs:

testopenjdk:

runs-on: ${{ matrix.os }}

strategy:

matrix:

# Linux and Windows only (MacOS is quite close to Linux, so less of a risk)

os: [ubuntu-latest, windows-latest]

java: [17, 21]

fail-fast: false

max-parallel: 4

name: Test JDK ${{ matrix.java }}, ${{ matrix.os }}

steps:

- uses: actions/checkout@v4

- name: Set up JDK

uses: actions/setup-java@v4

with:

distribution: 'oracle'

java-version: ${{ matrix.java }}

- name: Build and test (no integration tests)

# Integration tests are excluded here and run nightly instead, see

# nightly.yml. They depend on CATH, ECOD, RCSB, EBI and others being up

# and responsive, so running them on every pull request means a third

# party having a bad day blocks contributors, and a real regression

# cannot be told apart from the resulting noise. Master Build already

# excludes them for the same reason.

run: mvn verify -pl '!biojava-integrationtest' --no-transfer-progress

# Note that 11 is not available in openjdk. So we need to do it with the Zulu distribution (see https://github.com/actions/setup-java)

# When we drop 11, it will be safe to drop the copy-pasted workflow excerpt below

testzulu:

runs-on: ${{ matrix.os }}

strategy:

matrix:

# We do one OS only to reduce resource utilization. To do macOS to this would be needed:

#os: [ubuntu-20.04, macOS-latest]

os: [ubuntu-latest]

java: [11]

fail-fast: false

max-parallel: 4

name: Test JDK ${{ matrix.java }}, ${{ matrix.os }}

steps:

- uses: actions/checkout@v4

- name: Set up JDK

uses: actions/setup-java@v4

with:

distribution: 'zulu'

java-version: ${{ matrix.java }}

- name: Build and test (no integration tests)

# Integration tests are excluded here and run nightly instead, see

# nightly.yml. They depend on CATH, ECOD, RCSB, EBI and others being up

# and responsive, so running them on every pull request means a third

# party having a bad day blocks contributors, and a real regression

# cannot be told apart from the resulting noise. Master Build already

# excludes them for the same reason.

run: mvn verify -pl '!biojava-integrationtest' --no-transfer-progress